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Dept. of Biochemistry & Organic Chemistry

Carolina
DNA mol
PhD student

Research - Biochemistry

Current Research Projects in Biochemistry
Research Area Current Projects
Enzymology and drug discovery
Enzymology

  Enzymes as drug targets

  • HIV-1 protease and reverse transcriptase
  • CMV protease
  • HCV NS3 protease
  • Secreted proteases from Candida albicans
  • Matrix metalloproteinases (MMPs)
Biomolecular interactions

  Biosensor based interaction studies

  • Structure-kinetic relationships
  • Chemodynamics
  • Thermodynamics
Drug discovery
  •   Anti-AIDS drugs, HIV resistance
  •   Drugs against Candida albicans
  •   Drugs against Hepatitis C
  •   HCV resistance
    • HCV NS3 protease inhibitor resistance

  Matrix metalloprotease (MMP) related disorders

  • (tumor metastasis, inflammation, neurological and cardiovascular diseases)

  Allergy

  • Identification of cockroach allergens and their native interaction partners
Methodological expertise
  •   SPR based biosensor technology
  •   Enzyme inhibition analysis
Enzyme tools, molecular recognition
  • Enzymes for processing and analysis of wood and fibers
  • Enzymology for polymeric or insoluble substrates
  • Molecular recognition, separation science

 

Combinatorial protein chemistry, glutathione and biochemical toxicology
  • Multiple functions of glutathione transferases in prevention, drug resistance, and treatment of cancer
  • Functional genomics and enzymology of glutathione transferases
  • Recombinatorial protein evolution in multivariate functional space

 

Physiological functions of glutathione transferases
Physiological functions of glutathione transferases
  • Human GSTA3-3 and biosynthesis of steroid hormones
  • Identification of non-human mammalian alpha-class glutathione transferases involved in steroid hormone biosynthesis
  • Modulation of steroidogenesis through inhibition of alpha-class glutathione transferases
  • Control of expression of glutathione transferases (GSTs)
  • Transcriptional regulation of GSTs
  • Post-transcriptional regulation of GSTs
  • Interplay between transcriptional and post-transcriptional mechanisms of regulation for GSTs
  • Expression/function of GST splice variants
Protein folding

Proteins

  • Folding
  • Stability
  • Structure
  • Function

 

Directed evolution and engineering of enzymes and DNA-binding proteins α/β-hydrolase fold enzymes

Haloalkane dehalogenase

  • Catalytic mechanisms
  • Structure/function

Epoxide hydrolase
  • In vitro evolution and re-design of function
  • Functional genomics if α/β-hydrolase fold enzymes

 

Protein/DNA interactions

λ Cro

  • Structure/function of λ Cro
  • Tailor-making binding specificity